Carnation DB

Dca12859.1

Annotation

6-exons
f-1
sp|C6TJ70_SOYBN#Putative uncharacterized protein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0016021;GO:0004252;GO:0006508#1F1P1C
AT2G29050.1 | Symbols: ATRBL1, RBL1 | RHOMBOID-like 1 | chr2:12478245-12480121 FORWARD LENGTH=389
Repeat List (scaffold1593)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12859.1	52	391	392	59.43	340	69	1e-141
Target_name	Start	End	Length	Cov(%)
sp\|C6TJ70_SOYBN	44	383	384	88.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12859.1	1	391	392	56.63	391	57	3e-129
Target_name	Start	End	Length	Cov(%)
AT2G29050.1	1	388	389	99.74

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1593	Augus-PASA	mRNA	9681	14462	.	+	.	ID=Dca12859.1;Parent=Dca12859
scaffold1593	Augus-PASA	exon	9681	10021	.	+	.	ID=Dca12859.1.exon1;Parent=Dca12859.1
scaffold1593	Augus-PASA	exon	11120	11283	.	+	.	ID=Dca12859.1.exon2;Parent=Dca12859.1
scaffold1593	Augus-PASA	exon	12274	12437	.	+	.	ID=Dca12859.1.exon3;Parent=Dca12859.1
scaffold1593	Augus-PASA	exon	12528	12787	.	+	.	ID=Dca12859.1.exon4;Parent=Dca12859.1
scaffold1593	Augus-PASA	exon	13876	14002	.	+	.	ID=Dca12859.1.exon5;Parent=Dca12859.1
scaffold1593	Augus-PASA	exon	14340	14462	.	+	.	ID=Dca12859.1.exon6;Parent=Dca12859.1