Carnation DB

Dca12995.1

Annotation

21-exons
f-1
sp|B9HWX8_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_833657#GO:0005488#1F0P0C
AT3G06670.2 | Symbols: | binding | chr3:2105908-2113136 REVERSE LENGTH=886
Repeat List (scaffold16)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12995.1	1	724	729	66.25	724	65	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HWX8_POPTR	41	768	861	84.55

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca12995.1	1	728	729	60.21	728	57	0
Target_name	Start	End	Length	Cov(%)
AT3G06670.2	41	793	886	84.98

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold16	Augustus	mRNA	431050	437969	.	+	.	ID=Dca12995.1;Parent=Dca12995
scaffold16	Augustus	exon	431050	431155	.	+	.	ID=Dca12995.1.exon1;Parent=Dca12995.1
scaffold16	Augustus	exon	431247	431334	.	+	.	ID=Dca12995.1.exon2;Parent=Dca12995.1
scaffold16	Augustus	exon	431813	431862	.	+	.	ID=Dca12995.1.exon3;Parent=Dca12995.1
scaffold16	Augustus	exon	432161	432292	.	+	.	ID=Dca12995.1.exon4;Parent=Dca12995.1
scaffold16	Augustus	exon	432407	432480	.	+	.	ID=Dca12995.1.exon5;Parent=Dca12995.1
scaffold16	Augustus	exon	433083	433182	.	+	.	ID=Dca12995.1.exon6;Parent=Dca12995.1
scaffold16	Augustus	exon	433265	433342	.	+	.	ID=Dca12995.1.exon7;Parent=Dca12995.1
scaffold16	Augustus	exon	433520	433584	.	+	.	ID=Dca12995.1.exon8;Parent=Dca12995.1
scaffold16	Augustus	exon	433732	433800	.	+	.	ID=Dca12995.1.exon9;Parent=Dca12995.1
scaffold16	Augustus	exon	433879	433956	.	+	.	ID=Dca12995.1.exon10;Parent=Dca12995.1
scaffold16	Augustus	exon	434035	434130	.	+	.	ID=Dca12995.1.exon11;Parent=Dca12995.1
scaffold16	Augustus	exon	434257	434327	.	+	.	ID=Dca12995.1.exon12;Parent=Dca12995.1
scaffold16	Augustus	exon	434473	434550	.	+	.	ID=Dca12995.1.exon13;Parent=Dca12995.1
scaffold16	Augustus	exon	434774	434867	.	+	.	ID=Dca12995.1.exon14;Parent=Dca12995.1
scaffold16	Augustus	exon	435612	435710	.	+	.	ID=Dca12995.1.exon15;Parent=Dca12995.1
scaffold16	Augustus	exon	436371	436576	.	+	.	ID=Dca12995.1.exon16;Parent=Dca12995.1
scaffold16	Augustus	exon	436674	436788	.	+	.	ID=Dca12995.1.exon17;Parent=Dca12995.1
scaffold16	Augustus	exon	437109	437240	.	+	.	ID=Dca12995.1.exon18;Parent=Dca12995.1
scaffold16	Augustus	exon	437341	437448	.	+	.	ID=Dca12995.1.exon19;Parent=Dca12995.1
scaffold16	Augustus	exon	437520	437662	.	+	.	ID=Dca12995.1.exon20;Parent=Dca12995.1
scaffold16	Augustus	exon	437762	437969	.	+	.	ID=Dca12995.1.exon21;Parent=Dca12995.1