Carnation DB

Dca13059.1

Annotation

9-exons
f-1
sp|F6HKA8_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g05210#GO:0016021#0F0P1C
sp|B9SLP1_RICCO#Amino acid transporter, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0501150#GO:0016021#0F0P1C
Repeat List (scaffold1601)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13059.1	37	141	540	8.33	105	38	2e-14
Target_name	Start	End	Length	Cov(%)
sp\|F6HKA8_VITVI	18	136	517	23.01

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13059.1	31	114	540	8.51	84	53	7e-12
Target_name	Start	End	Length	Cov(%)
AT2G41190.1	29	115	536	16.23

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1601	Augustus	mRNA	37635	42191	.	+	.	ID=Dca13059.1;Parent=Dca13059
scaffold1601	Augustus	exon	37635	37849	.	+	.	ID=Dca13059.1.exon1;Parent=Dca13059.1
scaffold1601	Augustus	exon	39032	39358	.	+	.	ID=Dca13059.1.exon2;Parent=Dca13059.1
scaffold1601	Augustus	exon	40396	40658	.	+	.	ID=Dca13059.1.exon3;Parent=Dca13059.1
scaffold1601	Augustus	exon	40829	41043	.	+	.	ID=Dca13059.1.exon4;Parent=Dca13059.1
scaffold1601	Augus-PASA	exon	41159	41182	.	+	.	ID=Dca13059.1.exon5;Parent=Dca13059.1
scaffold1601	Augus-PASA	exon	41355	41535	.	+	.	ID=Dca13059.1.exon6;Parent=Dca13059.1
scaffold1601	Augus-PASA	exon	41623	41842	.	+	.	ID=Dca13059.1.exon7;Parent=Dca13059.1
scaffold1601	Augus-PASA	exon	41922	42057	.	+	.	ID=Dca13059.1.exon8;Parent=Dca13059.1
scaffold1601	Augustus	exon	42150	42191	.	+	.	ID=Dca13059.1.exon9;Parent=Dca13059.1