Dca13148.1
Annotation
- 3-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold16075)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13148.1 |
91 |
236 |
240 |
42.91 |
146 |
71 |
1e-58
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
171 |
316 |
964 |
15.14 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13148.1 |
91 |
236 |
240 |
27.91 |
146 |
46 |
4e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
585 |
731 |
1428 |
10.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16075 |
Augustus |
mRNA |
1 |
1418 |
. |
- |
. |
ID=Dca13148.1;Parent=Dca13148 |
| scaffold16075 |
Augustus |
exon |
1 |
450 |
. |
- |
. |
ID=Dca13148.1.exon1;Parent=Dca13148.1 |
| scaffold16075 |
Augustus |
exon |
1046 |
1076 |
. |
- |
. |
ID=Dca13148.1.exon2;Parent=Dca13148.1 |
| scaffold16075 |
Augustus |
exon |
1178 |
1418 |
. |
- |
. |
ID=Dca13148.1.exon3;Parent=Dca13148.1 |
