Carnation DB

Dca13189.1

Annotation

20-exons
f-1
sp|D7SY24_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0105g00480#GO:0042578#1F0P0C
AT3G51830.1 | Symbols: ATG5, SAC8 | SAC domain-containing protein 8 | chr3:19220237-19225092 FORWARD LENGTH=588
Repeat List (scaffold161)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13189.1	40	619	619	66.39	580	69	0
Target_name	Start	End	Length	Cov(%)
sp\|D7SY24_VITVI	11	606	606	98.34

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13189.1	40	619	619	60.74	580	65	0
Target_name	Start	End	Length	Cov(%)
AT3G51830.1	10	588	588	98.46

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold161	Augustus	mRNA	115605	121857	.	+	.	ID=Dca13189.1;Parent=Dca13189
scaffold161	Augustus	exon	115605	115845	.	+	.	ID=Dca13189.1.exon1;Parent=Dca13189.1
scaffold161	Augustus	exon	116710	116784	.	+	.	ID=Dca13189.1.exon2;Parent=Dca13189.1
scaffold161	Augustus	exon	116960	117087	.	+	.	ID=Dca13189.1.exon3;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	117166	117257	.	+	.	ID=Dca13189.1.exon4;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	117365	117422	.	+	.	ID=Dca13189.1.exon5;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	118077	118133	.	+	.	ID=Dca13189.1.exon6;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	118256	118289	.	+	.	ID=Dca13189.1.exon7;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	118434	118514	.	+	.	ID=Dca13189.1.exon8;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	118606	118712	.	+	.	ID=Dca13189.1.exon9;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	119007	119093	.	+	.	ID=Dca13189.1.exon10;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	119182	119259	.	+	.	ID=Dca13189.1.exon11;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	119349	119413	.	+	.	ID=Dca13189.1.exon12;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	119664	119762	.	+	.	ID=Dca13189.1.exon13;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	120211	120310	.	+	.	ID=Dca13189.1.exon14;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	120393	120501	.	+	.	ID=Dca13189.1.exon15;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	120584	120656	.	+	.	ID=Dca13189.1.exon16;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	120757	120850	.	+	.	ID=Dca13189.1.exon17;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	120939	121025	.	+	.	ID=Dca13189.1.exon18;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	121511	121577	.	+	.	ID=Dca13189.1.exon19;Parent=Dca13189.1
scaffold161	Augus-PASA	exon	121730	121857	.	+	.	ID=Dca13189.1.exon20;Parent=Dca13189.1