Dca13234.1
Annotation
- 4-exons
- f-1
- sp|Q8S760_ORYSJ#Putative retroelement#Oryza sativa subsp japonica (Rice)#Name=OSJNBb0081F12.7#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1612)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13234.1 |
1 |
448 |
458 |
48.68 |
448 |
49 |
1e-121
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q8S760_ORYSJ |
1041 |
1496 |
1496 |
30.48 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13234.1 |
278 |
452 |
458 |
18.12 |
175 |
40 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0627900-01 |
8 |
215 |
230 |
90.43 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1612 |
Augustus |
mRNA |
3687 |
5519 |
. |
- |
. |
ID=Dca13234.1;Parent=Dca13234 |
| scaffold1612 |
Augustus |
exon |
3687 |
4076 |
. |
- |
. |
ID=Dca13234.1.exon1;Parent=Dca13234.1 |
| scaffold1612 |
Augustus |
exon |
4175 |
4426 |
. |
- |
. |
ID=Dca13234.1.exon2;Parent=Dca13234.1 |
| scaffold1612 |
Augustus |
exon |
4632 |
5236 |
. |
- |
. |
ID=Dca13234.1.exon3;Parent=Dca13234.1 |
| scaffold1612 |
Augustus |
exon |
5390 |
5519 |
. |
- |
. |
ID=Dca13234.1.exon4;Parent=Dca13234.1 |
