Dca13236.1
Annotation
- 4-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1612)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13236.1 |
55 |
213 |
490 |
12.44 |
159 |
38 |
2e-27
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
1 |
162 |
1553 |
10.43 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13236.1 |
93 |
215 |
490 |
8.57 |
123 |
35 |
2e-14
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
202 |
296 |
41.55 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1612 |
Augustus |
mRNA |
9385 |
13069 |
. |
- |
. |
ID=Dca13236.1;Parent=Dca13236 |
| scaffold1612 |
Augustus |
exon |
9385 |
10198 |
. |
- |
. |
ID=Dca13236.1.exon1;Parent=Dca13236.1 |
| scaffold1612 |
Augustus |
exon |
10539 |
11035 |
. |
- |
. |
ID=Dca13236.1.exon2;Parent=Dca13236.1 |
| scaffold1612 |
Augustus |
exon |
11337 |
11406 |
. |
- |
. |
ID=Dca13236.1.exon3;Parent=Dca13236.1 |
| scaffold1612 |
Augustus |
exon |
12978 |
13069 |
. |
- |
. |
ID=Dca13236.1.exon4;Parent=Dca13236.1 |
