Carnation DB

Dca13308.1

Annotation

8-exons
f-1
sp|B9HWA4_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_880253#GO:0015297;GO:0015238#2F0P0C
sp|B9T1W3_RICCO#TRANSPARENT TESTA 12 protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0275570#GO:0016020;GO:0015297;GO:0015238#2F0P1C
Repeat List (scaffold1618)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13308.1	91	489	504	53.57	399	67	7e-160
Target_name	Start	End	Length	Cov(%)
sp\|B9HWA4_POPTR	77	479	482	83.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13308.1	99	483	504	46.82	385	62	3e-144
Target_name	Start	End	Length	Cov(%)
AT1G15170.1	91	475	481	80.04

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1618	Augustus	mRNA	72195	76448	.	-	.	ID=Dca13308.1;Parent=Dca13308
scaffold1618	Augustus	exon	72195	72284	.	-	.	ID=Dca13308.1.exon1;Parent=Dca13308.1
scaffold1618	Augustus	exon	72383	72588	.	-	.	ID=Dca13308.1.exon2;Parent=Dca13308.1
scaffold1618	Augustus	exon	72701	72939	.	-	.	ID=Dca13308.1.exon3;Parent=Dca13308.1
scaffold1618	Augustus	exon	73064	73120	.	-	.	ID=Dca13308.1.exon4;Parent=Dca13308.1
scaffold1618	Augustus	exon	73212	73298	.	-	.	ID=Dca13308.1.exon5;Parent=Dca13308.1
scaffold1618	Augustus	exon	73404	73948	.	-	.	ID=Dca13308.1.exon6;Parent=Dca13308.1
scaffold1618	Augustus	exon	74798	75059	.	-	.	ID=Dca13308.1.exon7;Parent=Dca13308.1
scaffold1618	Augustus	exon	76420	76448	.	-	.	ID=Dca13308.1.exon8;Parent=Dca13308.1