Dca13363.1
Annotation
- 3-exons
- f-1
- sp|F4NCI7_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- sp|Q2QQV8_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g29700#GO:0003723;GO:0003964;GO:0008270;GO:0006278#3F1P0C
- Repeat List (scaffold1620)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13363.1 |
1 |
527 |
528 |
50.18 |
527 |
42 |
5e-128
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCI7_BETVU |
423 |
1053 |
1362 |
46.32 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13363.1 |
11 |
422 |
528 |
29.73 |
412 |
34 |
2e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
350 |
817 |
857 |
54.6 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1620 |
Augustus |
mRNA |
27141 |
29029 |
. |
+ |
. |
ID=Dca13363.1;Parent=Dca13363 |
| scaffold1620 |
Augustus |
exon |
27141 |
28004 |
. |
+ |
. |
ID=Dca13363.1.exon1;Parent=Dca13363.1 |
| scaffold1620 |
Augustus |
exon |
28160 |
28557 |
. |
+ |
. |
ID=Dca13363.1.exon2;Parent=Dca13363.1 |
| scaffold1620 |
Augustus |
exon |
28705 |
29029 |
. |
+ |
. |
ID=Dca13363.1.exon3;Parent=Dca13363.1 |
