Dca13384.1
Annotation
- 2-exons
- f-1
- sp|Q10PG0_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os03g13260#GO:0003676;GO:0008270;GO:0015074#2F1P0C
- Repeat List (scaffold16213)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13384.1 |
121 |
468 |
469 |
44.77 |
348 |
59 |
2e-115
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q10PG0_ORYSJ |
1191 |
1545 |
1948 |
18.22 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13384.1 |
182 |
468 |
469 |
25.58 |
287 |
42 |
1e-63
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os11t0656500-01 |
883 |
1169 |
1401 |
20.48 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16213 |
Augustus |
mRNA |
2561 |
4047 |
. |
+ |
. |
ID=Dca13384.1;Parent=Dca13384 |
| scaffold16213 |
Augustus |
exon |
2561 |
3055 |
. |
+ |
. |
ID=Dca13384.1.exon1;Parent=Dca13384.1 |
| scaffold16213 |
Augustus |
exon |
3133 |
4047 |
. |
+ |
. |
ID=Dca13384.1.exon2;Parent=Dca13384.1 |
