Dca13393.1
Annotation
- 3-exons
- f-1
- sp|G9FIF2_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0004190;GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006508;GO:0006278#4F3P0C
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold16227)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13393.1 |
300 |
566 |
567 |
27.51 |
267 |
52 |
2e-80
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|G9FIF2_BETVU |
787 |
1087 |
1553 |
19.38 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13393.1 |
310 |
485 |
567 |
13.75 |
176 |
37 |
2e-29
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
791 |
998 |
1539 |
13.51 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold16227 |
Augustus |
mRNA |
49 |
3496 |
. |
- |
. |
ID=Dca13393.1;Parent=Dca13393 |
| scaffold16227 |
Augustus |
exon |
49 |
371 |
. |
- |
. |
ID=Dca13393.1.exon1;Parent=Dca13393.1 |
| scaffold16227 |
Augustus |
exon |
471 |
949 |
. |
- |
. |
ID=Dca13393.1.exon2;Parent=Dca13393.1 |
| scaffold16227 |
Augustus |
exon |
2596 |
3496 |
. |
- |
. |
ID=Dca13393.1.exon3;Parent=Dca13393.1 |
