Carnation DB

Dca13532.1

Annotation

5-exons
f-1
sp|F6HQC1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g00620#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
sp|B9RYJ7_RICCO#DNA binding protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0813720#GO:0005634;GO:0003677;GO:0006355;GO:0006351#1F2P1C
Repeat List (scaffold163)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13532.1	1	193	208	57.21	193	54	1e-53
Target_name	Start	End	Length	Cov(%)
sp\|F6HQC1_VITVI	1	219	252	86.9

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13532.1	4	194	208	49.51	191	53	2e-48
Target_name	Start	End	Length	Cov(%)
AT5G42700.1	7	200	211	91.94

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold163	Augustus	mRNA	217314	218509	.	-	.	ID=Dca13532.1;Parent=Dca13532
scaffold163	Augustus	exon	217314	217376	.	-	.	ID=Dca13532.1.exon1;Parent=Dca13532.1
scaffold163	Augustus	exon	217476	217682	.	-	.	ID=Dca13532.1.exon2;Parent=Dca13532.1
scaffold163	Augustus	exon	217797	217968	.	-	.	ID=Dca13532.1.exon3;Parent=Dca13532.1
scaffold163	Augustus	exon	218232	218290	.	-	.	ID=Dca13532.1.exon4;Parent=Dca13532.1
scaffold163	Augustus	exon	218384	218509	.	-	.	ID=Dca13532.1.exon5;Parent=Dca13532.1