Carnation DB

Dca13627.1

Annotation

8-exons
f-1
sp|A9PF05_POPTR#Putative uncharacterized protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#unknown#GO:0016773#1F0P0C
AT1G74320.1 | Symbols: | Protein kinase superfamily protein | chr1:27941192-27942903 FORWARD LENGTH=350
Repeat List (scaffold1634)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13627.1	66	405	406	62.31	340	74	5e-154
Target_name	Start	End	Length	Cov(%)
sp\|A9PF05_POPTR	1	343	359	95.54

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13627.1	64	406	406	57.63	343	68	1e-141
Target_name	Start	End	Length	Cov(%)
AT1G74320.1	1	347	350	99.14

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1634	Augustus	mRNA	30657	34727	.	+	.	ID=Dca13627.1;Parent=Dca13627
scaffold1634	Augustus	exon	30657	30832	.	+	.	ID=Dca13627.1.exon1;Parent=Dca13627.1
scaffold1634	Augustus	exon	31764	32127	.	+	.	ID=Dca13627.1.exon2;Parent=Dca13627.1
scaffold1634	Augus-PASA	exon	32368	32489	.	+	.	ID=Dca13627.1.exon3;Parent=Dca13627.1
scaffold1634	Augus-PASA	exon	32574	32766	.	+	.	ID=Dca13627.1.exon4;Parent=Dca13627.1
scaffold1634	Augus-PASA	exon	33041	33158	.	+	.	ID=Dca13627.1.exon5;Parent=Dca13627.1
scaffold1634	Augus-PASA	exon	33541	33588	.	+	.	ID=Dca13627.1.exon6;Parent=Dca13627.1
scaffold1634	Augus-PASA	exon	33722	33822	.	+	.	ID=Dca13627.1.exon7;Parent=Dca13627.1
scaffold1634	Augustus	exon	34629	34727	.	+	.	ID=Dca13627.1.exon8;Parent=Dca13627.1