Carnation DB

Dca1371.1

Annotation

22-exons
f-1
sp|B9HRR9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_722113#unknown#0F0P0C
Os07t0123700-00 PUL domain containing protein.
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1371.1	1	757	757	73.44	757	74	0
Target_name	Start	End	Length	Cov(%)
sp\|B9HRR9_POPTR	3	761	761	99.73

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1371.1	1	756	757	66.71	756	67	0
Target_name	Start	End	Length	Cov(%)
AT3G18860.1	3	760	760	99.73

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augus-PASA	mRNA	64826	73225	.	-	.	ID=Dca1371.1;Parent=Dca1371
scaffold104	Augus-PASA	exon	64826	64960	.	-	.	ID=Dca1371.1.exon1;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	65629	65694	.	-	.	ID=Dca1371.1.exon2;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	66052	66121	.	-	.	ID=Dca1371.1.exon3;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	66749	66825	.	-	.	ID=Dca1371.1.exon4;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	67124	67260	.	-	.	ID=Dca1371.1.exon5;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	67479	67556	.	-	.	ID=Dca1371.1.exon6;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	67643	67802	.	-	.	ID=Dca1371.1.exon7;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	68066	68152	.	-	.	ID=Dca1371.1.exon8;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	68399	68436	.	-	.	ID=Dca1371.1.exon9;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	68560	68598	.	-	.	ID=Dca1371.1.exon10;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	68687	68833	.	-	.	ID=Dca1371.1.exon11;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	68987	69046	.	-	.	ID=Dca1371.1.exon12;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	69396	69468	.	-	.	ID=Dca1371.1.exon13;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	69862	69950	.	-	.	ID=Dca1371.1.exon14;Parent=Dca1371.1
scaffold104	Augus-PASA	exon	70100	70161	.	-	.	ID=Dca1371.1.exon15;Parent=Dca1371.1
scaffold104	Augustus	exon	70445	70634	.	-	.	ID=Dca1371.1.exon16;Parent=Dca1371.1
scaffold104	Augustus	exon	70997	71136	.	-	.	ID=Dca1371.1.exon17;Parent=Dca1371.1
scaffold104	Augustus	exon	71308	71368	.	-	.	ID=Dca1371.1.exon18;Parent=Dca1371.1
scaffold104	Augustus	exon	71545	71613	.	-	.	ID=Dca1371.1.exon19;Parent=Dca1371.1
scaffold104	Augustus	exon	71972	72075	.	-	.	ID=Dca1371.1.exon20;Parent=Dca1371.1
scaffold104	Augustus	exon	72729	73060	.	-	.	ID=Dca1371.1.exon21;Parent=Dca1371.1
scaffold104	Augustus	exon	73166	73225	.	-	.	ID=Dca1371.1.exon22;Parent=Dca1371.1