Carnation DB

Dca1382.1

Annotation

7-exons
f-1
sp|F6HQL6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_03s0063g02410#GO:0005634;GO:0003677;GO:0008270;GO:0006355#2F1P1C
sp|B9H0P7_POPTR#Chromatin remodeling complex subunit#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#Name=CHB902#GO:0005634;GO:0003677;GO:0008270;GO:0006355#2F1P1C
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1382.1	1	991	1023	46.92	991	46	0
Target_name	Start	End	Length	Cov(%)
sp\|F6HQL6_VITVI	1	990	1023	96.77

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1382.1	1	664	1023	34.11	664	52	1e-153
Target_name	Start	End	Length	Cov(%)
AT4G34430.4	1	639	986	64.8

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augustus	mRNA	160269	168774	.	+	.	ID=Dca1382.1;Parent=Dca1382
scaffold104	Augustus	exon	160269	160773	.	+	.	ID=Dca1382.1.exon1;Parent=Dca1382.1
scaffold104	Augustus	exon	163845	164374	.	+	.	ID=Dca1382.1.exon2;Parent=Dca1382.1
scaffold104	Augustus	exon	165031	165714	.	+	.	ID=Dca1382.1.exon3;Parent=Dca1382.1
scaffold104	Augustus	exon	166478	166644	.	+	.	ID=Dca1382.1.exon4;Parent=Dca1382.1
scaffold104	Augustus	exon	166736	167364	.	+	.	ID=Dca1382.1.exon5;Parent=Dca1382.1
scaffold104	Augustus	exon	167641	167831	.	+	.	ID=Dca1382.1.exon6;Parent=Dca1382.1
scaffold104	Augus-PASA	exon	168409	168774	.	+	.	ID=Dca1382.1.exon7;Parent=Dca1382.1