Dca13837.1
Annotation
- 3-exons
- f-1
- sp|A2I5E5_BETVU#Retrotransposon protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold1646)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13837.1 |
244 |
594 |
594 |
23.73 |
351 |
36 |
4e-59
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A2I5E5_BETVU |
7 |
391 |
1501 |
25.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca13837.1 |
265 |
436 |
594 |
8.58 |
172 |
30 |
4e-16
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0315200-01 |
80 |
251 |
296 |
58.1 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1646 |
Augustus |
mRNA |
47918 |
51862 |
. |
+ |
. |
ID=Dca13837.1;Parent=Dca13837 |
| scaffold1646 |
Augustus |
exon |
47918 |
48385 |
. |
+ |
. |
ID=Dca13837.1.exon1;Parent=Dca13837.1 |
| scaffold1646 |
Augustus |
exon |
49609 |
49818 |
. |
+ |
. |
ID=Dca13837.1.exon2;Parent=Dca13837.1 |
| scaffold1646 |
Augustus |
exon |
50756 |
51862 |
. |
+ |
. |
ID=Dca13837.1.exon3;Parent=Dca13837.1 |
