Carnation DB

Dca13901.1

Annotation

6-exons
f-1
sp|B9IE93_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_574967#unknown#0F0P0C
sp|B9SU94_RICCO#Breast carcinoma amplified sequence, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0572020#unknown#0F0P0C
Repeat List (scaffold165)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13901.1	1	253	255	72.15	253	73	6e-105
Target_name	Start	End	Length	Cov(%)
sp\|B9IE93_POPTR	1	254	255	99.6

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca13901.1	6	248	255	63.52	243	67	4e-91
Target_name	Start	End	Length	Cov(%)
AT3G18165.1	3	246	253	96.44

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold165	Augus-PASA	mRNA	56389	62353	.	-	.	ID=Dca13901.1;Parent=Dca13901
scaffold165	Augus-PASA	exon	56389	56443	.	-	.	ID=Dca13901.1.exon1;Parent=Dca13901.1
scaffold165	Augus-PASA	exon	56534	56667	.	-	.	ID=Dca13901.1.exon2;Parent=Dca13901.1
scaffold165	Augus-PASA	exon	56763	56832	.	-	.	ID=Dca13901.1.exon3;Parent=Dca13901.1
scaffold165	Augus-PASA	exon	59787	59870	.	-	.	ID=Dca13901.1.exon4;Parent=Dca13901.1
scaffold165	Augus-PASA	exon	60391	60566	.	-	.	ID=Dca13901.1.exon5;Parent=Dca13901.1
scaffold165	Augus-PASA	exon	62105	62353	.	-	.	ID=Dca13901.1.exon6;Parent=Dca13901.1