Carnation DB

Dca1398.1

Annotation

7-exons
f-1
sp|F6I3P3_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0032g00780#GO:0005524;GO:0005509;GO:0004674#3F0P0C
AT2G38910.1 | Symbols: CPK20 | calcium-dependent protein kinase 20 | chr2:16245214-16247483 REVERSE LENGTH=583
Repeat List (scaffold104)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1398.1	1	536	542	80.07	536	77	0
Target_name	Start	End	Length	Cov(%)
sp\|F6I3P3_VITVI	1	565	568	99.47

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1398.1	1	536	542	76.75	536	72	0
Target_name	Start	End	Length	Cov(%)
AT2G38910.1	1	580	583	99.48

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold104	Augustus	mRNA	297685	301520	.	-	.	ID=Dca1398.1;Parent=Dca1398
scaffold104	Augustus	exon	297685	297774	.	-	.	ID=Dca1398.1.exon1;Parent=Dca1398.1
scaffold104	Augustus	exon	298089	298313	.	-	.	ID=Dca1398.1.exon2;Parent=Dca1398.1
scaffold104	Augustus	exon	298531	298698	.	-	.	ID=Dca1398.1.exon3;Parent=Dca1398.1
scaffold104	Augustus	exon	298780	298895	.	-	.	ID=Dca1398.1.exon4;Parent=Dca1398.1
scaffold104	Augustus	exon	299063	299215	.	-	.	ID=Dca1398.1.exon5;Parent=Dca1398.1
scaffold104	Augustus	exon	299311	299454	.	-	.	ID=Dca1398.1.exon6;Parent=Dca1398.1
scaffold104	Augustus	exon	300788	301520	.	-	.	ID=Dca1398.1.exon7;Parent=Dca1398.1