Dca1404.1
Annotation
- 2-exons
- f-1
- sp|Q9ZQM0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g11240#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1040)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1404.1 |
1 |
132 |
256 |
19.92 |
132 |
39 |
2e-22
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQM0_ARATH |
505 |
636 |
1044 |
12.64 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1404.1 |
3 |
133 |
256 |
17.96 |
131 |
35 |
1e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0643433-00 |
211 |
340 |
644 |
20.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1040 |
Augustus |
mRNA |
72267 |
73728 |
. |
+ |
. |
ID=Dca1404.1;Parent=Dca1404 |
| scaffold1040 |
Augustus |
exon |
72267 |
72665 |
. |
+ |
. |
ID=Dca1404.1.exon1;Parent=Dca1404.1 |
| scaffold1040 |
Augustus |
exon |
73357 |
73728 |
. |
+ |
. |
ID=Dca1404.1.exon2;Parent=Dca1404.1 |
