Carnation DB

Dca14070.1

Annotation

7-exons
f-1
sp|A9PGM9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_837084#GO:0005488#1F0P0C
AT1G62740.1 | Symbols: Hop2 | stress-inducible protein, putative | chr1:23231026-23233380 FORWARD LENGTH=571
Repeat List (scaffold166)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14070.1	1	192	611	9.49	192	30	2e-19
Target_name	Start	End	Length	Cov(%)
sp\|A9PGM9_POPTR	387	577	577	33.1

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14070.1	1	188	611	9.98	188	33	2e-23
Target_name	Start	End	Length	Cov(%)
AT1G62740.1	381	564	571	32.22

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold166	Augus-PASA	mRNA	203233	206867	.	+	.	ID=Dca14070.1;Parent=Dca14070
scaffold166	Augus-PASA	exon	203233	204132	.	+	.	ID=Dca14070.1.exon1;Parent=Dca14070.1
scaffold166	Augus-PASA	exon	204687	204975	.	+	.	ID=Dca14070.1.exon2;Parent=Dca14070.1
scaffold166	Augus-PASA	exon	205312	205397	.	+	.	ID=Dca14070.1.exon3;Parent=Dca14070.1
scaffold166	Augus-PASA	exon	205511	205734	.	+	.	ID=Dca14070.1.exon4;Parent=Dca14070.1
scaffold166	Augus-PASA	exon	205827	205953	.	+	.	ID=Dca14070.1.exon5;Parent=Dca14070.1
scaffold166	Augustus	exon	206033	206116	.	+	.	ID=Dca14070.1.exon6;Parent=Dca14070.1
scaffold166	Augustus	exon	206742	206867	.	+	.	ID=Dca14070.1.exon7;Parent=Dca14070.1