Dca1409.1
Annotation
- 4-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold10402)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1409.1 |
75 |
452 |
639 |
20.97 |
378 |
36 |
6e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
180 |
553 |
1365 |
27.39 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1409.1 |
73 |
475 |
639 |
18.77 |
403 |
30 |
3e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
101 |
471 |
857 |
43.29 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold10402 |
Augustus |
mRNA |
1 |
6487 |
. |
- |
. |
ID=Dca1409.1;Parent=Dca1409 |
| scaffold10402 |
Augustus |
exon |
1 |
511 |
. |
- |
. |
ID=Dca1409.1.exon1;Parent=Dca1409.1 |
| scaffold10402 |
Augustus |
exon |
620 |
669 |
. |
- |
. |
ID=Dca1409.1.exon2;Parent=Dca1409.1 |
| scaffold10402 |
Augustus |
exon |
3026 |
4155 |
. |
- |
. |
ID=Dca1409.1.exon3;Parent=Dca1409.1 |
| scaffold10402 |
Augustus |
exon |
6262 |
6487 |
. |
- |
. |
ID=Dca1409.1.exon4;Parent=Dca1409.1 |
