Dca14250.1
Annotation
- 2-exons
- f-1
- sp|O81506_ARATH#Putative retrotransposon protein#Arabidopsis thaliana (Mouse-ear cress)#Name=T7M24.7#GO:0003676;GO:0015074#1F1P0C
- Repeat List (scaffold1671)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14250.1 |
96 |
330 |
357 |
42.01 |
235 |
64 |
5e-88
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|O81506_ARATH |
149 |
383 |
964 |
24.37 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14250.1 |
88 |
309 |
357 |
23.8 |
222 |
38 |
6e-41
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
558 |
779 |
1428 |
15.54 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1671 |
Augustus |
mRNA |
304 |
2109 |
. |
+ |
. |
ID=Dca14250.1;Parent=Dca14250 |
| scaffold1671 |
Augustus |
exon |
304 |
558 |
. |
+ |
. |
ID=Dca14250.1.exon1;Parent=Dca14250.1 |
| scaffold1671 |
Augustus |
exon |
1291 |
2109 |
. |
+ |
. |
ID=Dca14250.1.exon2;Parent=Dca14250.1 |
