Carnation DB

Dca145.1

Annotation

8-exons
f-1
sp|A9PFH3_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_706110#GO:0016787#1F0P0C
sp|B9T676_RICCO#Catalytic, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0300260#GO:0016787#1F0P0C
Repeat List (scaffold10)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca145.1	8	285	285	59.64	278	61	3e-99
Target_name	Start	End	Length	Cov(%)
sp\|A9PFH3_POPTR	10	282	286	95.45

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca145.1	1	285	285	57.89	285	58	2e-96
Target_name	Start	End	Length	Cov(%)
AT5G59480.1	1	280	282	99.29

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10	Augus-PASA	mRNA	204235	205821	.	-	.	ID=Dca145.1;Parent=Dca145
scaffold10	Augus-PASA	exon	204235	204381	.	-	.	ID=Dca145.1.exon1;Parent=Dca145.1
scaffold10	Augus-PASA	exon	204492	204557	.	-	.	ID=Dca145.1.exon2;Parent=Dca145.1
scaffold10	Augus-PASA	exon	204644	204937	.	-	.	ID=Dca145.1.exon3;Parent=Dca145.1
scaffold10	Augus-PASA	exon	205036	205123	.	-	.	ID=Dca145.1.exon4;Parent=Dca145.1
scaffold10	Augus-PASA	exon	205215	205252	.	-	.	ID=Dca145.1.exon5;Parent=Dca145.1
scaffold10	Augus-PASA	exon	205338	205435	.	-	.	ID=Dca145.1.exon6;Parent=Dca145.1
scaffold10	Augus-PASA	exon	205571	205636	.	-	.	ID=Dca145.1.exon7;Parent=Dca145.1
scaffold10	Augustus	exon	205761	205821	.	-	.	ID=Dca145.1.exon8;Parent=Dca145.1