Carnation DB

Dca14581.1

Annotation

7-exons
f-1
sp|F6I4B4_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_05s0062g01340#unknown#0F0P0C
AT1G04590.2 | Symbols: | BEST Arabidopsis thaliana protein match is: Pentatricopeptide repeat (PPR) superfamily protein (TAIR:AT4G18975.4); Has 111 Blast hits to 111 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 109; Viruses - 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr1:1258760-1261411 REVERSE LENGTH=384
Repeat List (scaffold1695)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14581.1	41	254	270	48.88	214	62	4e-75
Target_name	Start	End	Length	Cov(%)
sp\|F6I4B4_VITVI	45	258	281	76.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14581.1	12	270	270	50	259	50	4e-69
Target_name	Start	End	Length	Cov(%)
AT1G04590.2	84	353	384	70.31

seqname	source	feature	start	end	score	strand	frame	group
scaffold1695	Augustus	mRNA	28163	32954	.	+	.	ID=Dca14581.1;Parent=Dca14581
scaffold1695	Augustus	exon	28163	28195	.	+	.	ID=Dca14581.1.exon1;Parent=Dca14581.1
scaffold1695	Augustus	exon	28323	28391	.	+	.	ID=Dca14581.1.exon2;Parent=Dca14581.1
scaffold1695	Augustus	exon	29487	29597	.	+	.	ID=Dca14581.1.exon3;Parent=Dca14581.1
scaffold1695	Augustus	exon	29831	29974	.	+	.	ID=Dca14581.1.exon4;Parent=Dca14581.1
scaffold1695	Augus-PASA	exon	31449	31661	.	+	.	ID=Dca14581.1.exon5;Parent=Dca14581.1
scaffold1695	Augus-PASA	exon	32202	32406	.	+	.	ID=Dca14581.1.exon6;Parent=Dca14581.1
scaffold1695	Augus-PASA	exon	32917	32954	.	+	.	ID=Dca14581.1.exon7;Parent=Dca14581.1