Carnation DB

Dca14632.1

Annotation

5-exons
f-1
sp|D7LDU5_ARALL#Putative uncharacterized protein#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_483034#GO:0016021;GO:0005787;GO:0008233;GO:0006465#1F1P2C
AT2G39960.1 | Symbols: | Microsomal signal peptidase 25 kDa subunit (SPC25) | chr2:16681666-16683491 REVERSE LENGTH=192
Repeat List (scaffold17)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14632.1	19	199	199	69.84	181	77	4e-78
Target_name	Start	End	Length	Cov(%)
sp\|D7LDU5_ARALL	12	192	192	94.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14632.1	19	199	199	69.34	181	77	7e-79
Target_name	Start	End	Length	Cov(%)
AT2G39960.1	12	192	192	94.27

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold17	Augus-PASA	mRNA	47522	50442	.	+	.	ID=Dca14632.1;Parent=Dca14632
scaffold17	Augus-PASA	exon	47522	47644	.	+	.	ID=Dca14632.1.exon1;Parent=Dca14632.1
scaffold17	Augus-PASA	exon	48919	49070	.	+	.	ID=Dca14632.1.exon2;Parent=Dca14632.1
scaffold17	Augus-PASA	exon	49244	49325	.	+	.	ID=Dca14632.1.exon3;Parent=Dca14632.1
scaffold17	Augus-PASA	exon	50110	50252	.	+	.	ID=Dca14632.1.exon4;Parent=Dca14632.1
scaffold17	Augus-PASA	exon	50343	50442	.	+	.	ID=Dca14632.1.exon5;Parent=Dca14632.1