Dca14687.1
Annotation
- 3-exons
- f-1
- sp|Q9ZQ67_ARATH#Putative retroelement pol polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g14380#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold170)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14687.1 |
216 |
357 |
555 |
8.82 |
142 |
34 |
3e-13
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZQ67_ARATH |
271 |
412 |
764 |
18.58 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14687.1 |
178 |
359 |
555 |
11.35 |
182 |
31 |
3e-12
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os03t0439900-01 |
63 |
248 |
421 |
44.18 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold170 |
Augustus |
mRNA |
41606 |
44146 |
. |
+ |
. |
ID=Dca14687.1;Parent=Dca14687 |
| scaffold170 |
Augustus |
exon |
41606 |
42678 |
. |
+ |
. |
ID=Dca14687.1.exon1;Parent=Dca14687.1 |
| scaffold170 |
Augustus |
exon |
43470 |
43536 |
. |
+ |
. |
ID=Dca14687.1.exon2;Parent=Dca14687.1 |
| scaffold170 |
Augustus |
exon |
43619 |
44146 |
. |
+ |
. |
ID=Dca14687.1.exon3;Parent=Dca14687.1 |
