Carnation DB

Dca14766.1

Annotation

8-exons
f-1
sp|B9SJ47_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_0843010#unknown#0F0P0C
AT1G23060.1 | Symbols: | BEST Arabidopsis thaliana protein match is: TPX2 (targeting protein for Xklp2) protein family (TAIR:AT1G70950.1); Has 449 Blast hits to 419 proteins in 98 species: Archae - 0; Bacteria - 40; Metazoa - 139; Fungi - 21; Plants - 158; Viruses - 3; Other Eukaryotes - 88 (source: NCBI BLink). | chr1:8170946-8172739 REVERSE LENGTH=367
Repeat List (scaffold1704)

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14766.1	1	214	697	13.34	214	39	5e-33
Target_name	Start	End	Length	Cov(%)
sp\|B9SJ47_RICCO	1	231	639	36.15

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14766.1	1	128	697	9.03	128	49	5e-28
Target_name	Start	End	Length	Cov(%)
AT1G23060.1	1	129	367	35.14

seqname	source	feature	start	end	score	strand	frame	group
scaffold1704	Augustus	mRNA	56188	59823	.	-	.	ID=Dca14766.1;Parent=Dca14766
scaffold1704	Augustus	exon	56188	56634	.	-	.	ID=Dca14766.1.exon1;Parent=Dca14766.1
scaffold1704	Augustus	exon	56735	56830	.	-	.	ID=Dca14766.1.exon2;Parent=Dca14766.1
scaffold1704	Augustus	exon	57076	57169	.	-	.	ID=Dca14766.1.exon3;Parent=Dca14766.1
scaffold1704	Augustus	exon	57258	57725	.	-	.	ID=Dca14766.1.exon4;Parent=Dca14766.1
scaffold1704	Augustus	exon	57820	57863	.	-	.	ID=Dca14766.1.exon5;Parent=Dca14766.1
scaffold1704	Augustus	exon	57982	58116	.	-	.	ID=Dca14766.1.exon6;Parent=Dca14766.1
scaffold1704	Augustus	exon	58239	59006	.	-	.	ID=Dca14766.1.exon7;Parent=Dca14766.1
scaffold1704	Augustus	exon	59782	59823	.	-	.	ID=Dca14766.1.exon8;Parent=Dca14766.1