Carnation DB

Dca14877.1

Annotation

6-exons
f-1
sp|B9RW32_RICCO#Putative uncharacterized protein#Ricinus communis (Castor bean)#ORFNames=RCOM_1175680#unknown#0F0P0C
AT2G14830.1 | Symbols: | Regulator of Vps4 activity in the MVB pathway protein | chr2:6362524-6365818 FORWARD LENGTH=454
Repeat List (scaffold1710)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14877.1	361	433	436	7.33	73	44	6e-06
Target_name	Start	End	Length	Cov(%)
sp\|B9RW32_RICCO	586	645	647	9.27

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca14877.1	17	196	436	20.41	180	50	1e-48
Target_name	Start	End	Length	Cov(%)
AT2G14830.1	85	264	454	39.64

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1710	Augustus	mRNA	15068	17492	.	-	.	ID=Dca14877.1;Parent=Dca14877
scaffold1710	Augustus	exon	15068	15781	.	-	.	ID=Dca14877.1.exon1;Parent=Dca14877.1
scaffold1710	Augustus	exon	15874	16014	.	-	.	ID=Dca14877.1.exon2;Parent=Dca14877.1
scaffold1710	Augustus	exon	16113	16284	.	-	.	ID=Dca14877.1.exon3;Parent=Dca14877.1
scaffold1710	Augustus	exon	16451	16554	.	-	.	ID=Dca14877.1.exon4;Parent=Dca14877.1
scaffold1710	Augustus	exon	16651	16783	.	-	.	ID=Dca14877.1.exon5;Parent=Dca14877.1
scaffold1710	Augustus	exon	17446	17492	.	-	.	ID=Dca14877.1.exon6;Parent=Dca14877.1