Dca14907.1
Annotation
- 3-exons
- f-1
- sp|B9GV25_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_754777#GO:0005488#1F0P0C
- AT5G18475.1 | Symbols: | Pentatricopeptide repeat (PPR) superfamily protein | chr5:6129255-6130775 REVERSE LENGTH=506
- Repeat List (scaffold1712)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14907.1 |
19 |
282 |
282 |
54.25 |
264 |
45 |
1e-76
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9GV25_POPTR |
14 |
355 |
509 |
67.19 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14907.1 |
25 |
282 |
282 |
47.16 |
258 |
40 |
3e-62
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT5G18475.1 |
21 |
361 |
506 |
67.39 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1712 |
Augustus |
mRNA |
54866 |
55957 |
. |
- |
. |
ID=Dca14907.1;Parent=Dca14907 |
| scaffold1712 |
Augustus |
exon |
54866 |
55124 |
. |
- |
. |
ID=Dca14907.1.exon1;Parent=Dca14907.1 |
| scaffold1712 |
Augustus |
exon |
55251 |
55487 |
. |
- |
. |
ID=Dca14907.1.exon2;Parent=Dca14907.1 |
| scaffold1712 |
Augustus |
exon |
55605 |
55957 |
. |
- |
. |
ID=Dca14907.1.exon3;Parent=Dca14907.1 |
