Dca14986.1
Annotation
- 2-exons
- f-1
- sp|Q2QRY4_ORYSJ#Retrotransposon protein, putative, Ty3-gypsy subclass#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g25980#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- Repeat List (scaffold17198)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14986.1 |
2 |
861 |
861 |
45.18 |
860 |
43 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2QRY4_ORYSJ |
385 |
1244 |
1541 |
55.8 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca14986.1 |
441 |
861 |
861 |
18.46 |
421 |
38 |
1e-73
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
701 |
1091 |
1539 |
25.4 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17198 |
Augustus |
mRNA |
37 |
3277 |
. |
- |
. |
ID=Dca14986.1;Parent=Dca14986 |
| scaffold17198 |
Augustus |
exon |
37 |
1311 |
. |
- |
. |
ID=Dca14986.1.exon1;Parent=Dca14986.1 |
| scaffold17198 |
Augustus |
exon |
1968 |
3277 |
. |
- |
. |
ID=Dca14986.1.exon2;Parent=Dca14986.1 |
