Carnation DB

Dca15004.1

Annotation

6-exons
f-1
sp|D7SJN5_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_06s0004g07560#unknown#0F0P0C
AT1G16870.1 | Symbols: | mitochondrial 28S ribosomal protein S29-related | chr1:5770964-5773157 REVERSE LENGTH=480
Repeat List (scaffold172)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15004.1	47	460	461	60.52	414	68	4e-164
Target_name	Start	End	Length	Cov(%)
sp\|D7SJN5_VITVI	43	456	457	90.59

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15004.1	56	460	461	59.43	405	67	2e-156
Target_name	Start	End	Length	Cov(%)
AT1G16870.1	72	479	480	85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold172	Augus-PASA	mRNA	179560	183161	.	+	.	ID=Dca15004.1;Parent=Dca15004
scaffold172	Augus-PASA	exon	179560	180109	.	+	.	ID=Dca15004.1.exon1;Parent=Dca15004.1
scaffold172	Augus-PASA	exon	181306	181517	.	+	.	ID=Dca15004.1.exon2;Parent=Dca15004.1
scaffold172	Augus-PASA	exon	181644	181895	.	+	.	ID=Dca15004.1.exon3;Parent=Dca15004.1
scaffold172	Augus-PASA	exon	182033	182119	.	+	.	ID=Dca15004.1.exon4;Parent=Dca15004.1
scaffold172	Augus-PASA	exon	182261	182433	.	+	.	ID=Dca15004.1.exon5;Parent=Dca15004.1
scaffold172	Augus-PASA	exon	183050	183161	.	+	.	ID=Dca15004.1.exon6;Parent=Dca15004.1