Dca15016.1
Annotation
- 4-exons
- f-1
- sp|B9I1R9_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_834085#unknown#0F0P0C
- AT1G53400.1 | Symbols: | Ubiquitin domain-containing protein | chr1:19925009-19926400 FORWARD LENGTH=114
- Repeat List (scaffold172)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15016.1 |
25 |
126 |
126 |
64.28 |
102 |
80 |
2e-45
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I1R9_POPTR |
13 |
114 |
114 |
89.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15016.1 |
25 |
122 |
126 |
62.69 |
98 |
81 |
1e-44
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT1G53400.1 |
13 |
110 |
114 |
85.96 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold172 |
Augustus |
mRNA |
271722 |
273537 |
. |
+ |
. |
ID=Dca15016.1;Parent=Dca15016 |
| scaffold172 |
Augustus |
exon |
271722 |
271794 |
. |
+ |
. |
ID=Dca15016.1.exon1;Parent=Dca15016.1 |
| scaffold172 |
Augustus |
exon |
272877 |
272999 |
. |
+ |
. |
ID=Dca15016.1.exon2;Parent=Dca15016.1 |
| scaffold172 |
Augustus |
exon |
273240 |
273359 |
. |
+ |
. |
ID=Dca15016.1.exon3;Parent=Dca15016.1 |
| scaffold172 |
Augustus |
exon |
273473 |
273537 |
. |
+ |
. |
ID=Dca15016.1.exon4;Parent=Dca15016.1 |
