Carnation DB

Dca1504.1

Annotation

12-exons
f-1
sp|B9HQP1_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_558319#GO:0008270#1F0P0C
sp|Q9ZTM6_PETHY#PGPD14#Petunia hybrida (Petunia)#Name=PGPD14#GO:0008270#1F0P0C
Repeat List (scaffold1045)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1504.1	33	108	154	20.12	76	41	2e-07
Target_name	Start	End	Length	Cov(%)
sp\|F2CQ69_HORVD	2	77	245	31.02

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1504.1	26	279	279	60.21	254	66	2e-99
Target_name	Start	End	Length	Cov(%)
AT5G22920.1	17	271	291	87.62

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1045	Augus-PASA	mRNA	86781	91099	.	+	.	ID=Dca1504.1;Parent=Dca1504
scaffold1045	Augus-PASA	exon	86781	86884	.	+	.	ID=Dca1504.1.exon1;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	87276	87363	.	+	.	ID=Dca1504.1.exon2;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	87464	87523	.	+	.	ID=Dca1504.1.exon3;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	89078	89110	.	+	.	ID=Dca1504.1.exon4;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	89200	89277	.	+	.	ID=Dca1504.1.exon5;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	89385	89428	.	+	.	ID=Dca1504.1.exon6;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	89719	89759	.	+	.	ID=Dca1504.1.exon7;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	89846	89928	.	+	.	ID=Dca1504.1.exon8;Parent=Dca1504.1
scaffold1045	Augus-PASA	exon	90067	90158	.	+	.	ID=Dca1504.1.exon9;Parent=Dca1504.1
scaffold1045	Augustus	exon	90388	90457	.	+	.	ID=Dca1504.1.exon10;Parent=Dca1504.1
scaffold1045	Augustus	exon	90857	90895	.	+	.	ID=Dca1504.1.exon11;Parent=Dca1504.1
scaffold1045	Augustus	exon	90992	91099	.	+	.	ID=Dca1504.1.exon12;Parent=Dca1504.1