Dca15044.1
Annotation
- 3-exons
- f-1
- sp|Q9ZVF0_ARATH#Putative non-LTR retroelement reverse transcriptase#Arabidopsis thaliana (Mouse-ear cress)#Name=At2g01550#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Repeat List (scaffold1720)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15044.1 |
73 |
411 |
664 |
21.23 |
339 |
37 |
2e-64
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9ZVF0_ARATH |
771 |
1156 |
1449 |
26.63 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15044.1 |
4 |
296 |
664 |
14.6 |
293 |
32 |
2e-34
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
196 |
501 |
857 |
35.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1720 |
Augustus |
mRNA |
87432 |
89990 |
. |
+ |
. |
ID=Dca15044.1;Parent=Dca15044 |
| scaffold1720 |
Augustus |
exon |
87432 |
87831 |
. |
+ |
. |
ID=Dca15044.1.exon1;Parent=Dca15044.1 |
| scaffold1720 |
Augustus |
exon |
87921 |
88411 |
. |
+ |
. |
ID=Dca15044.1.exon2;Parent=Dca15044.1 |
| scaffold1720 |
Augustus |
exon |
88887 |
89990 |
. |
+ |
. |
ID=Dca15044.1.exon3;Parent=Dca15044.1 |
