Carnation DB

Dca15051.1

Annotation

5-exons
f-1
sp|B9IQ27_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_914069#GO:0016020;GO:0000155#1F0P1C
AT1G24706.2 | Symbols: THO2 | THO2 | chr1:8742210-8755250 FORWARD LENGTH=1823
Repeat List (scaffold17205)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15051.1	2	140	141	61.7	139	57	3e-43
Target_name	Start	End	Length	Cov(%)
sp\|B9IQ27_POPTR	4	152	1836	8.11

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15051.1	1	134	141	58.15	134	56	2e-39
Target_name	Start	End	Length	Cov(%)
AT1G24706.2	1	144	1823	7.89

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold17205	Augustus	mRNA	1098	5169	.	+	.	ID=Dca15051.1;Parent=Dca15051
scaffold17205	Augustus	exon	1098	1244	.	+	.	ID=Dca15051.1.exon1;Parent=Dca15051.1
scaffold17205	Augustus	exon	1354	1479	.	+	.	ID=Dca15051.1.exon2;Parent=Dca15051.1
scaffold17205	Augustus	exon	3568	3627	.	+	.	ID=Dca15051.1.exon3;Parent=Dca15051.1
scaffold17205	Augustus	exon	3724	3786	.	+	.	ID=Dca15051.1.exon4;Parent=Dca15051.1
scaffold17205	Augustus	exon	5140	5169	.	+	.	ID=Dca15051.1.exon5;Parent=Dca15051.1