Dca15260.1
Annotation
- 4-exons
- f-1
- sp|D7LQ57_ARALL#ATWHY3/PTAC11#Arabidopsis lyrata subsp lyrata (Lyre-leaved rock-cress)#ORFNames=ARALYDRAFT_484180#GO:0003677;GO:0006355#1F1P0C
- Repeat List (scaffold1734)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15260.1 |
37 |
113 |
114 |
49.12 |
77 |
71 |
6e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|D7LQ57_ARALL |
79 |
157 |
268 |
29.47 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15260.1 |
39 |
113 |
114 |
48.24 |
75 |
72 |
1e-26
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G02740.1 |
81 |
157 |
268 |
28.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1734 |
Augustus |
mRNA |
13831 |
17920 |
. |
+ |
. |
ID=Dca15260.1;Parent=Dca15260 |
| scaffold1734 |
Augustus |
exon |
13831 |
13942 |
. |
+ |
. |
ID=Dca15260.1.exon1;Parent=Dca15260.1 |
| scaffold1734 |
Augus-PASA |
exon |
17427 |
17521 |
. |
+ |
. |
ID=Dca15260.1.exon2;Parent=Dca15260.1 |
| scaffold1734 |
Augus-PASA |
exon |
17628 |
17720 |
. |
+ |
. |
ID=Dca15260.1.exon3;Parent=Dca15260.1 |
| scaffold1734 |
Augustus |
exon |
17876 |
17920 |
. |
+ |
. |
ID=Dca15260.1.exon4;Parent=Dca15260.1 |
