Carnation DB

Dca15339.1

Annotation

6-exons
f-1
sp|F6GXW1_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0058g01440#GO:0005524;GO:0004674#2F0P0C
Os03t0334000-02 Similar to Ribosomal protein S6 kinase.
Repeat List (scaffold174)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15339.1	10	477	480	68.75	468	69	0
Target_name	Start	End	Length	Cov(%)
sp\|F6GXW1_VITVI	12	489	489	97.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15339.1	1	477	480	66.25	477	66	0
Target_name	Start	End	Length	Cov(%)
Os03t0334000-02	1	480	481	99.79

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold174	Augustus	mRNA	221142	223558	.	-	.	ID=Dca15339.1;Parent=Dca15339
scaffold174	Augustus	exon	221142	221456	.	-	.	ID=Dca15339.1.exon1;Parent=Dca15339.1
scaffold174	Augustus	exon	221539	221646	.	-	.	ID=Dca15339.1.exon2;Parent=Dca15339.1
scaffold174	Augustus	exon	221725	221898	.	-	.	ID=Dca15339.1.exon3;Parent=Dca15339.1
scaffold174	Augustus	exon	221988	222108	.	-	.	ID=Dca15339.1.exon4;Parent=Dca15339.1
scaffold174	Augustus	exon	222234	222316	.	-	.	ID=Dca15339.1.exon5;Parent=Dca15339.1
scaffold174	Augustus	exon	222917	223558	.	-	.	ID=Dca15339.1.exon6;Parent=Dca15339.1