Carnation DB

Dca15556.1

Annotation

5-exons
f-1
sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
Repeat List (scaffold1754)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15556.1	274	987	1124	27.84	714	41	2e-136
Target_name	Start	End	Length	Cov(%)
sp\|E2DN01_BETVU	12	728	1717	41.75

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15556.1	5	107	1124	3.29	103	36	5e-09
Target_name	Start	End	Length	Cov(%)
Os04t0128300-01	2	97	122	78.68

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1754	Augustus	mRNA	85787	90672	.	+	.	ID=Dca15556.1;Parent=Dca15556
scaffold1754	Augustus	exon	85787	86228	.	+	.	ID=Dca15556.1.exon1;Parent=Dca15556.1
scaffold1754	Augustus	exon	86329	86500	.	+	.	ID=Dca15556.1.exon2;Parent=Dca15556.1
scaffold1754	Augustus	exon	87596	88441	.	+	.	ID=Dca15556.1.exon3;Parent=Dca15556.1
scaffold1754	Augustus	exon	88519	90167	.	+	.	ID=Dca15556.1.exon4;Parent=Dca15556.1
scaffold1754	Augustus	exon	90407	90672	.	+	.	ID=Dca15556.1.exon5;Parent=Dca15556.1