Carnation DB

Dca1556.1

Annotation

5-exons
f-1
sp|D7TU02_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_02s0012g00900#GO:0003677#1F0P0C
AT4G17950.1 | Symbols: | AT hook motif DNA-binding family protein | chr4:9967295-9969007 REVERSE LENGTH=439
Repeat List (scaffold1048)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1556.1	39	398	398	46.98	360	51	7e-83
Target_name	Start	End	Length	Cov(%)
sp\|D7TU02_VITVI	23	353	353	93.76

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1556.1	106	389	398	37.68	284	48	9e-56
Target_name	Start	End	Length	Cov(%)
AT4G17950.1	123	434	439	71.07

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1048	Augustus	mRNA	15183	18849	.	-	.	ID=Dca1556.1;Parent=Dca1556
scaffold1048	Augustus	exon	15183	15470	.	-	.	ID=Dca1556.1.exon1;Parent=Dca1556.1
scaffold1048	Augustus	exon	15614	15775	.	-	.	ID=Dca1556.1.exon2;Parent=Dca1556.1
scaffold1048	Augustus	exon	17047	17178	.	-	.	ID=Dca1556.1.exon3;Parent=Dca1556.1
scaffold1048	Augustus	exon	18031	18083	.	-	.	ID=Dca1556.1.exon4;Parent=Dca1556.1
scaffold1048	Augustus	exon	18288	18849	.	-	.	ID=Dca1556.1.exon5;Parent=Dca1556.1