Dca15636.1
Annotation
- 4-exons
- f-1
- sp|B9G6I4_ORYSJ#Putative uncharacterized protein#Oryza sativa subsp japonica (Rice)#ORFNames=OsJ_32080#GO:0008270#1F0P0C
- sp|Q2QY69_ORYSJ#Transposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os12g03660#GO:0008270#1F0P0C
- Repeat List (scaffold176)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15636.1 |
28 |
700 |
961 |
39.43 |
673 |
56 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9G6I4_ORYSJ |
1 |
668 |
993 |
67.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15636.1 |
20 |
717 |
961 |
27.36 |
698 |
37 |
3e-131
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0421700-01 |
201 |
892 |
985 |
70.25 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold176 |
Augustus |
mRNA |
133661 |
138752 |
. |
+ |
. |
ID=Dca15636.1;Parent=Dca15636 |
| scaffold176 |
Augustus |
exon |
133661 |
135895 |
. |
+ |
. |
ID=Dca15636.1.exon1;Parent=Dca15636.1 |
| scaffold176 |
Augustus |
exon |
137875 |
138181 |
. |
+ |
. |
ID=Dca15636.1.exon2;Parent=Dca15636.1 |
| scaffold176 |
Augustus |
exon |
138305 |
138441 |
. |
+ |
. |
ID=Dca15636.1.exon3;Parent=Dca15636.1 |
| scaffold176 |
Augustus |
exon |
138546 |
138752 |
. |
+ |
. |
ID=Dca15636.1.exon4;Parent=Dca15636.1 |
