Carnation DB

Dca1568.1

Annotation

6-exons
f-1
sp|B9T128_RICCO#Clathrin assembly protein, putative#Ricinus communis (Castor bean)#ORFNames=RCOM_0271960#GO:0030118;GO:0005545;GO:0032440;GO:0030276;GO:0048268#3F1P1C
Repeat List (scaffold10482)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1568.1	6	119	224	43.3	114	86	4e-53
Target_name	Start	End	Length	Cov(%)
sp\|B9T128_RICCO	4	117	548	20.8

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1568.1	12	119	224	39.73	108	83	2e-49
Target_name	Start	End	Length	Cov(%)
AT5G35200.1	11	118	544	19.85

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold10482	Augustus	mRNA	3709	6415	.	-	.	ID=Dca1568.1;Parent=Dca1568
scaffold10482	Augustus	exon	3709	3790	.	-	.	ID=Dca1568.1.exon1;Parent=Dca1568.1
scaffold10482	Augustus	exon	3900	3972	.	-	.	ID=Dca1568.1.exon2;Parent=Dca1568.1
scaffold10482	Augustus	exon	4321	4416	.	-	.	ID=Dca1568.1.exon3;Parent=Dca1568.1
scaffold10482	Augustus	exon	5679	5744	.	-	.	ID=Dca1568.1.exon4;Parent=Dca1568.1
scaffold10482	Augustus	exon	5945	6029	.	-	.	ID=Dca1568.1.exon5;Parent=Dca1568.1
scaffold10482	Augustus	exon	6143	6415	.	-	.	ID=Dca1568.1.exon6;Parent=Dca1568.1