Dca15708.1
Annotation
- 3-exons
- f-1
- sp|A5AUE6_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#ORFNames=VITISV_021034#GO:0005524;GO:0003676;GO:0004674;GO:0005529;GO:0015074;GO:0048544#4F2P0C
- sp|B5U9F7_SOYBN#Gag-protease-integrase-RT-RNaseH polyprotein#Glycine max (Soybean) (Glycine hispida)#unknown#GO:0003676;GO:0008233;GO:0008270;GO:0015074;GO:0006508#3F2P0C
- Repeat List (scaffold17644)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15708.1 |
175 |
441 |
441 |
43.31 |
267 |
72 |
4e-110
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|A5AUE6_VITVI |
661 |
927 |
2026 |
13.17 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15708.1 |
175 |
441 |
441 |
21.99 |
267 |
36 |
5e-50
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os08t0125300-01 |
981 |
1238 |
1428 |
18.06 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold17644 |
Augustus |
mRNA |
136 |
3715 |
. |
- |
. |
ID=Dca15708.1;Parent=Dca15708 |
| scaffold17644 |
Augustus |
exon |
136 |
938 |
. |
- |
. |
ID=Dca15708.1.exon1;Parent=Dca15708.1 |
| scaffold17644 |
Augustus |
exon |
3109 |
3281 |
. |
- |
. |
ID=Dca15708.1.exon2;Parent=Dca15708.1 |
| scaffold17644 |
Augustus |
exon |
3366 |
3715 |
. |
- |
. |
ID=Dca15708.1.exon3;Parent=Dca15708.1 |
