Dca15887.1
Annotation
- 3-exons
- f-1
- sp|F4NCH8_BETVU#Putative uncharacterized protein#Beta vulgaris subsp vulgaris#unknown#GO:0003723;GO:0003964;GO:0006278#2F1P0C
- Os06t0484800-00 Reverse transcriptase domain containing protein.
- Repeat List (scaffold1779)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15887.1 |
10 |
1196 |
1242 |
33.57 |
1187 |
34 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|F4NCH8_BETVU |
119 |
1339 |
1365 |
89.45 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca15887.1 |
13 |
781 |
1242 |
19.64 |
769 |
30 |
2e-100
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os06t0484800-00 |
43 |
850 |
857 |
94.28 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1779 |
Augustus |
mRNA |
33342 |
39846 |
. |
- |
. |
ID=Dca15887.1;Parent=Dca15887 |
| scaffold1779 |
Augustus |
exon |
33342 |
33435 |
. |
- |
. |
ID=Dca15887.1.exon1;Parent=Dca15887.1 |
| scaffold1779 |
Augustus |
exon |
36038 |
39209 |
. |
- |
. |
ID=Dca15887.1.exon2;Parent=Dca15887.1 |
| scaffold1779 |
Augustus |
exon |
39384 |
39846 |
. |
- |
. |
ID=Dca15887.1.exon3;Parent=Dca15887.1 |
