Carnation DB

Dca15943.1

Annotation

7-exons
f-1
sp|B9MU53_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_826620#GO:0005634;GO:0003684;GO:0008853;GO:0006281#2F1P1C
AT4G17760.1 | Symbols: | damaged DNA binding;exodeoxyribonuclease IIIs | chr4:9871820-9873257 FORWARD LENGTH=300
Repeat List (scaffold1782)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15943.1	1	289	293	82.25	289	83	1e-144
Target_name	Start	End	Length	Cov(%)
sp\|B9MU53_POPTR	6	296	303	96.03

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca15943.1	7	289	293	74.74	283	78	2e-138
Target_name	Start	End	Length	Cov(%)
AT4G17760.1	15	297	300	94.33

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold1782	Augustus	mRNA	18920	21912	.	-	.	ID=Dca15943.1;Parent=Dca15943
scaffold1782	Augustus	exon	18920	19151	.	-	.	ID=Dca15943.1.exon1;Parent=Dca15943.1
scaffold1782	Augustus	exon	19272	19342	.	-	.	ID=Dca15943.1.exon2;Parent=Dca15943.1
scaffold1782	Augustus	exon	19426	19545	.	-	.	ID=Dca15943.1.exon3;Parent=Dca15943.1
scaffold1782	Augustus	exon	19939	20059	.	-	.	ID=Dca15943.1.exon4;Parent=Dca15943.1
scaffold1782	Augustus	exon	20831	20985	.	-	.	ID=Dca15943.1.exon5;Parent=Dca15943.1
scaffold1782	Augustus	exon	21642	21731	.	-	.	ID=Dca15943.1.exon6;Parent=Dca15943.1
scaffold1782	Augustus	exon	21820	21912	.	-	.	ID=Dca15943.1.exon7;Parent=Dca15943.1