Dca1600.1
Annotation
- 2-exons
- f-1
- sp|Q2R2I1_ORYSJ#Retrotransposon protein, putative, unclassified#Oryza sativa subsp japonica (Rice)#ORFNames=LOC_Os11g35740#unknown#0F0P0C
- Repeat List (scaffold105)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1600.1 |
1 |
261 |
261 |
57.08 |
261 |
57 |
5e-72
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q2R2I1_ORYSJ |
818 |
1064 |
1064 |
23.21 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca1600.1 |
1 |
236 |
261 |
33.33 |
236 |
33 |
2e-32
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT4G23160.1 |
310 |
578 |
1262 |
21.31 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold105 |
Augustus |
mRNA |
37319 |
38207 |
. |
- |
. |
ID=Dca1600.1;Parent=Dca1600 |
| scaffold105 |
Augustus |
exon |
37319 |
37828 |
. |
- |
. |
ID=Dca1600.1.exon1;Parent=Dca1600.1 |
| scaffold105 |
Augustus |
exon |
37932 |
38207 |
. |
- |
. |
ID=Dca1600.1.exon2;Parent=Dca1600.1 |
