Dca16133.1
Annotation
- 2-exons
- f-1
- sp|Q9LHM4_ARATH#Gypsy/Ty-3 retroelement polyprotein#Arabidopsis thaliana (Mouse-ear cress)#Name=T21B14.24#GO:0005634;GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P1C
- Repeat List (scaffold1794)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16133.1 |
3 |
759 |
761 |
52.03 |
757 |
49 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|Q9LHM4_ARATH |
319 |
1126 |
1499 |
53.9 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16133.1 |
3 |
761 |
761 |
39.02 |
759 |
37 |
2e-134
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os04t0191000-01 |
345 |
1109 |
1539 |
49.7 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1794 |
Augustus |
mRNA |
56772 |
59204 |
. |
+ |
. |
ID=Dca16133.1;Parent=Dca16133 |
| scaffold1794 |
Augustus |
exon |
56772 |
58213 |
. |
+ |
. |
ID=Dca16133.1.exon1;Parent=Dca16133.1 |
| scaffold1794 |
Augustus |
exon |
58363 |
59204 |
. |
+ |
. |
ID=Dca16133.1.exon2;Parent=Dca16133.1 |
