Carnation DB

Dca1614.1

Annotation

5-exons
f-1
sp|F6HKM2_VITVI#Putative uncharacterized protein#Vitis vinifera (Grape)#OrderedLocusNames=VIT_08s0007g03140#GO:0005622;GO:0007165#0F1P1C
AT5G22400.1 | Symbols: | Rho GTPase activating protein with PAK-box/P21-Rho-binding domain | chr5:7423050-7425335 REVERSE LENGTH=466
Repeat List (scaffold105)

Sequences

Blastp Summary

Trem (Uniprot-tremble)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1614.1	17	487	487	56.05	471	52	7e-128
Target_name	Start	End	Length	Cov(%)
sp\|F6HKM2_VITVI	23	533	533	95.87

AtOs (Arabidopsis thaliana & Oryza sativa)

Query_name	Start	End	Length	Cov(%)	Match_len	Iden(%)	p-value
Dca1614.1	82	487	487	47.63	406	57	7e-118
Target_name	Start	End	Length	Cov(%)
AT5G22400.1	89	466	466	81.11

Coding region

seqname	source	feature	start	end	score	strand	frame	group
scaffold105	Augustus	mRNA	141942	143961	.	-	.	ID=Dca1614.1;Parent=Dca1614
scaffold105	Augustus	exon	141942	142442	.	-	.	ID=Dca1614.1.exon1;Parent=Dca1614.1
scaffold105	Augustus	exon	142519	142749	.	-	.	ID=Dca1614.1.exon2;Parent=Dca1614.1
scaffold105	Augustus	exon	142920	143039	.	-	.	ID=Dca1614.1.exon3;Parent=Dca1614.1
scaffold105	Augustus	exon	143143	143263	.	-	.	ID=Dca1614.1.exon4;Parent=Dca1614.1
scaffold105	Augustus	exon	143471	143961	.	-	.	ID=Dca1614.1.exon5;Parent=Dca1614.1