Dca16252.1
Annotation
- 3-exons
- f-1
- sp|B9I5L0_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_241338#GO:0003676;GO:0008270#2F0P0C
- Os12t0597300-01 Similar to Mutator-like transposase-like protein.
- Repeat List (scaffold180)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16252.1 |
410 |
976 |
981 |
18.75 |
567 |
32 |
2e-81
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9I5L0_POPTR |
11 |
579 |
581 |
97.93 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16252.1 |
410 |
974 |
981 |
17.63 |
565 |
30 |
1e-75
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0597300-01 |
178 |
745 |
750 |
75.73 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold180 |
Augustus |
mRNA |
54087 |
57305 |
. |
- |
. |
ID=Dca16252.1;Parent=Dca16252 |
| scaffold180 |
Augustus |
exon |
54087 |
54655 |
. |
- |
. |
ID=Dca16252.1.exon1;Parent=Dca16252.1 |
| scaffold180 |
Augustus |
exon |
54805 |
55159 |
. |
- |
. |
ID=Dca16252.1.exon2;Parent=Dca16252.1 |
| scaffold180 |
Augustus |
exon |
55284 |
57305 |
. |
- |
. |
ID=Dca16252.1.exon3;Parent=Dca16252.1 |
