Dca16287.1
Annotation
- 3-exons
- f-1
- sp|E2DN01_BETVU#Putative uncharacterized protein#Beta vulgaris (Sugar beet)#unknown#GO:0003723;GO:0003964;GO:0008270;GO:0015074;GO:0006278#3F2P0C
- sp|Q9FZN9_ARATH#Retroelement pol polyprotein-like#Arabidopsis thaliana (Mouse-ear cress)#unknown#GO:0003723;GO:0003964;GO:0015074;GO:0006278#2F2P0C
- Repeat List (scaffold1801)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16287.1 |
3 |
391 |
737 |
44.64 |
389 |
76 |
0
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|E2DN01_BETVU |
821 |
1254 |
1717 |
25.27 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16287.1 |
44 |
387 |
737 |
17.36 |
344 |
35 |
5e-54
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| Os12t0142900-02 |
237 |
602 |
707 |
51.76 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1801 |
Augustus |
mRNA |
62870 |
68490 |
. |
- |
. |
ID=Dca16287.1;Parent=Dca16287 |
| scaffold1801 |
Augustus |
exon |
62870 |
63910 |
. |
- |
. |
ID=Dca16287.1.exon1;Parent=Dca16287.1 |
| scaffold1801 |
Augustus |
exon |
67183 |
67985 |
. |
- |
. |
ID=Dca16287.1.exon2;Parent=Dca16287.1 |
| scaffold1801 |
Augustus |
exon |
68121 |
68490 |
. |
- |
. |
ID=Dca16287.1.exon3;Parent=Dca16287.1 |
