Dca16317.1
Annotation
- 4-exons
- f-1
- sp|B9II97_POPTR#Predicted protein#Populus trichocarpa (Western balsam poplar) (Populus balsamifera subsp trichocarpa)#ORFNames=POPTRDRAFT_825121#unknown#0F0P0C
- Repeat List (scaffold1804)
Sequences
Blastp Summary
Trem (Uniprot-tremble)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16317.1 |
1 |
320 |
335 |
39.4 |
320 |
37 |
3e-43
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| sp|B9II97_POPTR |
1 |
334 |
341 |
97.94 |
AtOs (Arabidopsis thaliana & Oryza sativa)
| Query_name |
Start |
End |
Length |
Cov(%) |
Match_len |
Iden(%) |
p-value |
| Dca16317.1 |
213 |
324 |
335 |
17.61 |
112 |
53 |
3e-18
|
| Target_name |
Start |
End |
Length |
Cov(%) |
| AT2G42040.1 |
163 |
250 |
269 |
32.71 |
Coding region
| seqname |
source |
feature |
start |
end |
score |
strand |
frame |
group |
| scaffold1804 |
Augus-PASA |
mRNA |
65052 |
68459 |
. |
+ |
. |
ID=Dca16317.1;Parent=Dca16317 |
| scaffold1804 |
Augus-PASA |
exon |
65052 |
65363 |
. |
+ |
. |
ID=Dca16317.1.exon1;Parent=Dca16317.1 |
| scaffold1804 |
Augus-PASA |
exon |
65821 |
65867 |
. |
+ |
. |
ID=Dca16317.1.exon2;Parent=Dca16317.1 |
| scaffold1804 |
Augus-PASA |
exon |
67160 |
67242 |
. |
+ |
. |
ID=Dca16317.1.exon3;Parent=Dca16317.1 |
| scaffold1804 |
Augus-PASA |
exon |
67894 |
68459 |
. |
+ |
. |
ID=Dca16317.1.exon4;Parent=Dca16317.1 |
